3±0.2 or 1070.9±37.8 nmol methane cm−3 day−1,

respectively). The AOM rates were lower with nitrate (881.3±0.7 nmol methane cm−3 day−1) or with 2 mM sulfate (479.0±6.4 0.0 nmol methane cm−3 day−1). The original Zeebrugge sediment contained 16S rRNA gene copy numbers of 2.6 × 109 copies cm−3 for Bacteria and 3.1 × 108 copies cm−3 for Archaea (Fig. S1 in Appendix S1). Compared with the sediment used as an inoculum, a significant increase of the methanogenic (Methanosarcina mcrA) and the methanotrophic (ANME-1 and -2 mcrA) populations was observed in microcosms Sirolimus molecular weight with ferrihydrite and hexadecane (Fig. 5). With sulfate and methane, only the number of ANME-2 copies increased. The growth of Geobacteraceae– selleck compound although present in significant numbers – was not initiated by the addition of hexadecane or electron acceptors compared with the inoculum (Fig. 5). In contrast, the addition of sulfate and/or ferrihydrite stimulated the growth of the sulfate-reducing community in the microcosms. Experiments with ethylbenzene, naphthalene, nitrate or manganese were not monitored by real-time PCR. 16S rRNA gene clone libraries of Bacteria (n=82) and Archaea (n=93) of the Zeebrugge sediment

revealed a broad microbial diversity (Figs S2–S4 in Appendix S1). Among Bacteria, Alpha-, Gamma- and Deltaproteobacteria 16S rRNA gene sequences were recovered as well as sequences associated with Campylobacterales, crotamiton Planctomycetes, Clostridia, Actinobacteria and Chloroflexi. 16S rRNA gene sequences associated with potential pathogens, such as Neisseria and Coxiella, were also found as well as sequences associated with Geobacteraceae. Seven potential aerobic iron oxidizers of the family Acidithiobacillaceae and another seven of the Acidimicrobinea could be identified. Some clones were closely related to sequences recovered in other potentially hydrocarbon influenced environments such as the Victoria Harbour in Hong Kong, China (Zhang et al., 2008), the Belgian coast off Zeebrugge (Gillan & Pernet, 2007), the Milano mud volcano (Heijs et al., 2005) as well as the Gullfaks and Tommeliten

oil fields of the North Sea (Wegener et al., 2008; Fig. S2 in Appendix S1). The phylogenetic diversity of Archaea comprised Crenarchaeota and Euryarchaeota. In the latter, members of the Methanosarcina prevailed. Electron acceptors may accelerate hydrocarbon degradation, thus providing an increased substrate supply for methanogenesis. In this work, we evaluate the hypothesis that the addition of electron acceptors leads to accelerated hydrocarbon-dependent methanogenesis. This process may be useful to stimulate the recovery of oil-related carbon as methane from reservoirs or for bioremediation of contaminated sites. Our aim was to stimulate the initial steps in hydrocarbon degradation and thus the formation of methanogenic substrates such as acetate, CO2 and H2.